Wheat Relative history

Associated files

In the paper entitled « Pervasive hybridizations in the history of wheat relatives » we provide a comprehensive phylogenomic analysis that reveals that the genomes of cultivated wheats result of multiple rounds of hybridization. Here are the datafiles supporting this analysis

Gene list

• MappedOnHordeumChromosomes_OneCopyGenes.txt (< 1Mo)

Alignments

• Concatenation10Mb_OneCopyGenes.zip (68 Mo)
• FullConcatenation_OneCopyGenes.zip (120 Mo)
• IndividualAlignements_OneCopyGenes.zip (23 Mo)

Trees

• MLtree_OneCopyGenes.tree (< 1Mo)
• MLtree_OneCopyGenes_ultrametric.tree (< 1Mo)
• Densitree_OneCopyGenes.nex (< 1Mo)

Hyde results

• HydeResults_OneCopyGenes.csv (< 2 Mo)

Readme file and full archive

• README.txt (< 1Mo)
• Wheat_Relative_History_Data_Glemin_et_al.zip (< 200Mo)

Citing

If you find those datasets useful, please cite:

« Pervasive hybridizations in the history of wheat relatives »
Sylvain Glémin, Celine Scornavacca, Jacques Dainat, Concetta Burgarella, Véronique Viader, Morgane Ardisson, Gautier Sarah, Sylvain Santoni, Jacques David, and Vincent Ranwez. accepted for publication in Science Advances (2019).